FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14177454
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG96850.06.155070394-95
GCGTCGT100300.05.80128394-95
GAGCGTC129900.05.75917694-95
AGCGTCG109650.05.739792394-95
AGAGCGT137000.05.61672894-95
ATCGGAA187300.05.55386494-95
TCGTGTA82200.05.518492794-95
CGTGTAG92550.05.517228694-95
AGATCGG210400.05.474632394-95
GTCGTGT92250.05.40644694-95
GATCGGA193350.05.35551594-95
TAGATCG63200.05.298597394-95
TAAGCGT20750.05.150546694-95
GTAAGCG26100.05.095730394-95
TCGGAAG197400.05.053137394-95
Produced by FastQC (version 0.11.5)