FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15230238
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG77000.06.23046994-95
TCGTGTA94850.06.184715794-95
GCGTCGT115450.06.02745394-95
GATCGGA227400.05.94267494-95
CGTGTAG97750.05.90404494-95
AGATCGG249500.05.882718694-95
AGCGTCG125000.05.794953394-95
GTCGTGT101200.05.74971692-93
ATCGGAA217650.05.69602694-95
TCGGAAG222150.05.644788794-95
CGTCGTG111950.05.452175692-93
AGAGCGT159000.05.407188494-95
GAGCGTC149150.05.350275594-95
CGGAAGA232200.05.20613894-95
Produced by FastQC (version 0.11.5)