FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12232583
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA90650.06.104403594-95
AGATCGG237950.05.908688594-95
ATCGGAA209300.05.78703494-95
GATCGGA217050.05.77735794-95
TAGATCG76000.05.749887594-95
ACGTCTG101650.05.700823394-95
TCGGAAG212450.05.544725494-95
ACACGTC108150.05.511912394-95
CACACGT125900.05.357321394-95
CGGAAGA213850.05.31962994-95
GCACACG143450.05.264797794-95
CACGTCT109200.05.263175594-95
AAGATCG79350.05.058187594-95
Produced by FastQC (version 0.11.5)