FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16760431
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC136850.06.47317994-95
CACGTCT137750.05.896415794-95
ATCGGAA269850.05.887857494-95
GATCGGA281100.05.81274494-95
CGTCTGA110400.05.743753494-95
AGATCGG308600.05.65646494-95
TCGGAAG275800.05.64889194-95
ACGTCTG123600.05.572282394-95
CACACGT165400.05.542496794-95
TAGATCG94150.05.448626594-95
GCACACG187050.05.3961694-95
CGGAAGA280200.05.255053594-95
Produced by FastQC (version 0.11.5)