FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16760431
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT123300.07.049808594-95
AGCGTCG153050.06.81224894-95
TCGTGTA112500.06.776598594-95
GCGTCGT138300.06.680157794-95
CGTCGTG132750.06.530066594-95
CGTGTAG110900.06.124826494-95
GAGCGTC179750.06.07782594-95
AGAGCGT191250.05.886215794-95
ATCGGAA270350.05.83312194-95
GATCGGA281850.05.738367694-95
AAGAGCG216700.05.69906694-95
TCGGAAG275800.05.66618794-95
AGATCGG307550.05.66040594-95
TAGATCG92800.05.37440894-95
CGGAAGA279300.05.34008394-95
ACTCGAC32800.05.213362794-95
Produced by FastQC (version 0.11.5)