FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12604219
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA111200.06.51411694-95
CTAGTCG22100.06.23298694-95
AGCGTCG129850.05.92602594-95
CGTGTAG111600.05.916175494-95
TAGATCG73950.05.909354794-95
GTCGTGT123450.05.906193794-95
ATCGGAA220100.05.80527394-95
GAGCGTC153300.05.76316794-95
AGAGCGT162000.05.688229694-95
GATCGGA230300.05.671907494-95
TCGGAAG225400.05.552864694-95
CGTCGTG114950.05.51649992-93
AGATCGG250700.05.40931494-95
TAGTCGT23550.05.34497194-95
GCGTCGT119850.05.2909594-95
AAGAGCG179350.05.177686794-95
Produced by FastQC (version 0.11.5)