FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15558548
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA243700.06.032418794-95
CGTCTGA107650.05.95670594-95
TAGATCG82750.05.74008594-95
GATCGGA252750.05.684870294-95
TCGGAAG248450.05.544282494-95
ACACGTC130250.05.48839294-95
ACGTCTG118500.05.45138694-95
AGATCGG272650.05.409317594-95
CACACGT154700.05.066172694-95
CACGTCT132550.05.01689194-95
Produced by FastQC (version 0.11.5)