FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15558548
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG141100.06.143657794-95
ATCGGAA241200.06.09501194-95
GCGTCGT128400.06.085441694-95
GTCGTGT117750.05.92990394-95
CGTCGTG122800.05.87944694-95
TCGTGTA106000.05.847844694-95
CGTGTAG107800.05.77223194-95
GATCGGA251950.05.71241194-95
TAGATCG83800.05.63988594-95
AGAGCGT179100.05.596004594-95
TCGGAAG249600.05.42364894-95
AGATCGG274200.05.42210794-95
AAGAGCG199300.05.29098994-95
GAGCGTC167050.05.2177294-95
Produced by FastQC (version 0.11.5)