FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13959887
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA184200.06.08564894-95
TAGATCG62900.05.927934694-95
AGATCGG200050.05.876531694-95
ATCGGAA176700.05.658482694-95
ACACGTC99800.05.616113794-95
CACGTCT102250.05.13314394-95
ACGTCTG90900.05.0686594-95
CGTCTGA83500.05.005882394-95
Produced by FastQC (version 0.11.5)