FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8211352
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA59500.06.785610794-95
GTCGTGT66550.06.56639194-95
CGTGTAG64250.06.431808594-95
GATCGGA138500.06.138895594-95
GCGTCGT71450.06.11607192-93
CGTCGTG69050.06.053491694-95
ATCGGAA132400.06.0091694-95
AGATCGG152050.05.87297894-95
AGCGTCG77250.05.872078494-95
TCGGAAG135450.05.523171494-95
AGAGCGT95500.05.22243394-95
GAGCGTC89800.05.13076894-95
TAGATCG43450.05.02869292-93
Produced by FastQC (version 0.11.5)