FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7485940
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG76000.06.53121594-95
GCGTCGT69600.06.346948694-95
CGTCGTG65600.05.82885694-95
GAGCGTC88850.05.74701594-95
ATCGGAA130250.05.597858494-95
GTCGTGT63050.05.574910694-95
GATCGGA134950.05.543690794-95
TCGTGTA58500.05.521337594-95
AGAGCGT93050.05.51313692-93
TAGATCG44500.05.497161494-95
AGATCGG148250.05.46287194-95
AAGATCG49850.05.43126594-95
TCGGAAG131800.05.27975294-95
AAGAGCG104650.05.219752394-95
CGTGTAG59550.05.18469194-95
CGGAAGA132650.05.01316694-95
Produced by FastQC (version 0.11.5)