FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8302822
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG76600.06.386998794-95
GCGTCGT70050.06.03490294-95
CGTGTAG58550.05.92221794-95
TAGATCG47950.05.894088794-95
AGATCGG153700.05.88720994-95
GAGCGTC90900.05.80025994-95
TCGTGTA58150.05.799585394-95
ATCGGAA134950.05.59644994-95
GATCGGA139300.05.592179394-95
TCGGAAG138500.05.504445694-95
CGGAAGA141050.05.404932594-95
GTCGTGT64200.05.40102592-93
AGAGCGT96050.05.340903394-95
AAGAGCG108700.05.309273294-95
CAGATCG54250.05.297170694-95
CGTCGTG68500.05.27000994-95
Produced by FastQC (version 0.11.5)