FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7602311
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG112450.05.723540394-95
GATCGGA102600.05.671182694-95
CACACGT68350.05.420520394-95
CGTAATC11403.691821E-85.416558392-93
ACACGTC55400.05.272908794-95
ATCGGAA98750.05.17078292-93
CGCAACG14653.088644E-95.025496594-95
Produced by FastQC (version 0.11.5)