FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7602311
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG51550.06.81853894-95
AGCGTCG58200.06.20267292-93
GCGTCGT53200.06.16063894-95
AGATCGG113150.05.772133494-95
GATCGGA102150.05.64970994-95
GTCGTGT49500.05.517608694-95
TAGATCG36200.05.314160394-95
ATCGGAA98350.05.215999692-93
TCGTGTA43900.05.193557394-95
GAGCGTC68850.05.17422794-95
AAGAGCG85700.05.15454594-95
Produced by FastQC (version 0.11.5)