FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8880583
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA159900.05.985654494-95
TCGGAAG163700.05.730643794-95
GATCGGA166000.05.708471394-95
AGATCGG181100.05.69149494-95
CGGAAGA164550.05.61444494-95
CGTATGC9903.708701E-75.51756894-95
CGTCTGA72350.05.449097692-93
ACGTCTG80550.05.3956194-95
GTACGAT14403.601599E-105.277673294-95
TAGATCG53750.05.213850590-91
AAGATCG59800.05.083511494-95
ACACGTC86600.05.046089692-93
Produced by FastQC (version 0.11.5)