FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8880583
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA159500.05.95605994-95
AGATCGG182200.05.800578694-95
CGGAAGA162300.05.794771794-95
TCGGAAG163200.05.7337194-95
AGCGTCG93200.05.733585494-95
GATCGGA167550.05.669897694-95
CGTGTAG72950.05.59967594-95
TCGTGTA72600.05.56124494-95
GCGTCGT84900.05.426923894-95
GTCGTGT79200.05.33770492-93
GAGCGTC107000.05.19387894-95
GTAGGGA78850.05.180676594-95
CGTCGTG82650.05.143631594-95
AGAGCGT113150.05.10048494-95
TAGATCG54350.05.06895194-95
Produced by FastQC (version 0.11.5)