FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8538363
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA124700.06.17069492-93
TCGGAAG129600.06.029014694-95
TAGATCG43800.06.018722594-95
CGGAAGA131450.05.926096494-95
GATCGGA129100.05.850006692-93
AGATCGG142500.05.73322694-95
CACACGT79150.05.431041294-95
ACACGTC66950.05.250087794-95
Produced by FastQC (version 0.11.5)