FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9327190
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCATA4650.00150377739.193495
ACACGTC67150.05.906419894-95
CACACGT82100.05.58300594-95
ATCGGAA128150.05.57829894-95
TAGATCG45600.05.57279194-95
TCGGAAG131700.05.427933794-95
GATCGGA131550.05.32580292-93
AAGATCG48600.05.17992594-95
CGGAAGA133250.05.15091694-95
AGATCGG142900.05.13546994-95
Produced by FastQC (version 0.11.5)