FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9327190
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG67550.06.64504194-95
GCGTCGT68900.06.308019694-95
GTCGTGT63800.06.21665894-95
AGCGTCG75550.05.78421792-93
TCGTGTA57250.05.60040594-95
TAGATCG42300.05.558479394-95
ATCGGAA128700.05.46228594-95
TCGGAAG132100.05.375632394-95
GATCGGA131400.05.259673692-93
GAGCGTC88500.05.233021792-93
AGATCGG144850.05.09921294-95
AGAGCGT93750.05.09197294-95
AAGAGCG105700.05.010615394-95
Produced by FastQC (version 0.11.5)