FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7986836
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG30050.05.76941194-95
AGATCGG98000.05.743483594-95
GATCGGA88100.05.44538494-95
ATCGGAA85650.05.323863594-95
TCGGAAG91300.05.22851594-95
TATGCCG7802.2856447E-45.176188592-93
ACGATTG13701.6061676E-85.027281892-93
Produced by FastQC (version 0.11.5)