FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20736255
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG99450.06.23288294-95
GATCGGA304000.05.69517594-95
AGATCGG331800.05.683256694-95
ATCGGAA294300.05.584303494-95
CACGTCT194650.05.148861494-95
TCGGAAG303950.05.110092694-95
CGTCTGA136400.05.101600694-95
CACACGT191400.05.01294194-95
Produced by FastQC (version 0.11.5)