FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28214898
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA444050.05.88855294-95
ACACGTC238400.05.787925794-95
ATCGGAA426700.05.68828594-95
AGATCGG487150.05.684456394-95
TAGATCG149200.05.571245794-95
CGTCTGA192550.05.525703494-95
CACGTCT238050.05.47718394-95
ACGTCTG214900.05.359921594-95
TCGGAAG440500.05.299814794-95
CGGAAGA450000.05.04015694-95
Produced by FastQC (version 0.11.5)