FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23297993
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT212700.06.2193794-95
CGTCGTG204350.06.055105794-95
TCGTGTA176150.05.824514494-95
GATCGGA411650.05.746320794-95
ATCCGTA48250.05.709779394-95
AGCGTCG228500.05.68538494-95
CGTGTAG181450.05.62820894-95
ATCGGAA394350.05.576834794-95
AGAGCGT286400.05.547684794-95
TCGGAAG400450.05.491883894-95
AGATCGG450250.05.491053694-95
GAGCGTC269500.05.37563494-95
TAGATCG136900.05.36060492-93
GTCGTGT193900.05.279078594-95
CGGAAGA408250.05.2647994-95
AAGAGCG318300.05.043926294-95
Produced by FastQC (version 0.11.5)