FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113795686
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGAAA330350.017.411271
GGAATCT511800.016.5615441
ATCGGCG203900.016.48591
TGCGACG278800.016.469331
ACGACGA193550.016.357689
CACGACG291700.016.3388188
AGCCGAA179100.016.3373558
CGGGAAG114150.016.3204423
GCCCGAA236250.016.2393341
AGACGGA143000.016.1399738
CGATGAG180500.016.0939963
CGACGAA196650.016.08463110
GCGGATC295500.016.0530321
CTGGCAG265050.016.0332051
CGAGAGC148950.015.9185676
CACCCTA449900.015.8725268
GGGAAGA114750.015.7730664
AAAGAGC113200.015.7513526
CGGCGCA149150.015.6887233
GATGAGC147200.015.6654094
Produced by FastQC (version 0.11.5)