FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005765605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113795686
Sequences flagged as poor quality0
Sequence length98
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGCAGT4687950.074.828871
AGCAGTG5005900.069.995032
GCAGTGG5987850.058.4589843
CAGTGGT5986550.058.424354
GTGGTAT6279400.055.6369326
GGTATCA6354500.055.020468
TGGTATC6356300.054.9362757
GTATCAA6459900.054.1765029
AGTGGTA6499300.053.8774455
ACGACGC52650.032.9360965
CGACGCT55100.031.3043446
ATCAACG6278900.030.23139410-11
CAACGCA6305700.030.1214512-13
TACATGG6605650.028.16391222-23
GCAGAGT6736450.028.15206516-17
AGAGTAC6720750.028.14691718-19
TCAACGC6252350.028.11316912-13
AGTACAT6734300.027.9333220-21
CGCAGAG6397700.027.52727116-17
CACGACG64350.027.3054244
Produced by FastQC (version 0.11.5)