FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6177383
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1157.496328E-637.5652168
CGGAGTC18708.640818E-76.93048149
ACGGAGT25101.0039341E-45.1633478
Produced by FastQC (version 0.11.5)