FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5754457
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1900.060.6315848
TCGGCGG4050.028.4444459
TATCGGC5453.6379788E-1219.8165157
TTATCGG4909.398718E-917.6326526
TCGTCGC3550.011.35774715-19
CGTCGCT4600.09.39130415-19
CCGATCG2151.2672135E-69.37674455-59
ATTATCG9252.0796362E-59.3405415
CTCGTCG4350.08.60689615-19
CCAGTAC32700.07.4862387
CAGTACC34200.06.94736868
CGATCGC3100.00116832256.03870960-64
AGTACCT42450.05.9363969
CCGGCGA4203.8102833E-55.828571330-34
CGGCGAG4652.9873268E-55.574193530-34
CGGAGTC17750.0058374235.2732395
TCCGGCG4752.4394439E-45.15368425-29
Produced by FastQC (version 0.11.5)