FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1517029
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG607.0924034E-660.0000048
TCGGCGG1051.9311167E-434.2857179
TTATCGG1153.2938586E-431.3043486
TATCGGC1153.2938586E-431.3043487
CCGATCG555.540376E-620.94545455-59
TCGTCGC651.0523127E-619.93846115-19
ATTATCG2750.00276040815.7090915
CTCGTCG757.9757636E-515.36000115-19
CCCGATC1500.00264407748.6455-59
CCTCGTC3450.00417224275.42608715-19
Produced by FastQC (version 0.11.5)