FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2472751
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG850.093.1764768
TATCGGC1650.048.07
TCGGCGG2005.456968E-1239.6000029
TTATCGG2405.644688E-827.06
TCGTCGC1201.135777E-714.415-19
ATTATCG4854.711442E-513.3608255
CTCGTCG1303.0151932E-713.29230915-19
TCCGGCG1451.1324792E-611.91724225-29
CGTCGCT1401.2382667E-410.28571515-19
CCGGCGA1902.8297835E-48.33684330-34
GTTACCG2252.2708944E-58.3220-24
TCGTTAC2056.402355E-47.726829515-19
CGGCGAG2300.00217301356.886956730-34
CGTTACC2600.00107446366.646154415-19
TACCGAA2956.4231764E-46.345762720-24
TTACCGA2850.00302142986.06315820-24
AATCCGG2950.0044382555.85762725-29
AACCGCT3559.483784E-45.678873105-109
GGGTTCG4101.6819808E-45.619512610-14
ATCCGGC3400.00351229945.505882725-29
Produced by FastQC (version 0.11.5)