FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005766222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005766222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4465248
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1450.059.5862058
TCGGCGG2650.035.3207559
TATCGGC3255.638867E-1126.5846167
TTATCGG4058.8039087E-1021.3333346
ATTATCG6906.222617E-712.5217395
CGATCGG900.005438822311.2130-134
CGGCGAG3052.1792057E-67.55409830-34
CCGGCGA2753.449528E-57.33090930-34
GAATCCG5051.1031863E-47.12871272
TCCGGCG3007.8714034E-46.240000225-29
AATCCGG4703.5425197E-56.12765933
ATCCGGC4601.5095844E-45.32173925-29
TACCGAA4506.3153094E-45.1220-24
Produced by FastQC (version 0.11.5)