FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005766338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005766338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3242558
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG954.8567017E-1060.6315848
TCGGCGG1801.3749377E-732.09
TATCGGC2207.9612437E-726.1818187
TTATCGG2908.7677545E-619.8620686
TCGTCGC1253.914214E-511.519999515-19
CTCGTCG1203.4265642E-410.815-19
CGTCGCT1502.1399677E-510.5615-19
CGATCCC3000.00534906425.7690-94
CAGTACC16700.00284267125.60479078
AGACCTC23502.0801781E-45.20851041
CCAGTAC18250.0080748625.1287677
Produced by FastQC (version 0.11.5)