FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005766683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005766683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2213588
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1004.9705704E-850.3999988
TCGGCGG1804.9634964E-628.09
TATCGGC1856.1419832E-627.2432427
TTATCGG2308.3454885E-418.7826086
GACGAAG3150.00680641113.7142866
ATTATCG4350.00422175111.5862075
CTCGTCG1451.4707193E-510.92413815-19
TCGTCGC1307.165241E-49.96923115-19
CAGTACC13302.2158138E-57.57894758
CCGAATC2300.00217296286.886956720-24
CCAGTAC12900.0072149746.13953457
Produced by FastQC (version 0.11.5)