FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005766714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005766714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3275201
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1150.075.130438
TATCGGC2650.035.3207557
TCGGCGG3002.0008883E-1128.8000019
TTATCGG4002.910383E-1123.46
ATTATCG6351.421904E-814.7401575
CCGGCGA1902.3324901E-710.61052630-34
TCCGGCG1902.8299287E-48.33684325-29
GTCTCGC14901.5349269E-67.73154354
AGTCTCG14506.937795E-56.95172363
CGGCGAG2506.879025E-46.91230-34
TCGCTCT17651.9103161E-56.5269127
ATCCGGC2905.221357E-46.455172525-29
CTCGCTC16503.722913E-46.10909136
TCGTTAC2850.00302159836.06315815-19
GTTACCG3100.00116822236.03870920-24
CGCTCTG17005.462117E-45.92941148
TCTCGCT17759.475985E-45.6788735
GGTTCGT3700.0094685735.059459715-19
Produced by FastQC (version 0.11.5)