FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005766762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005766762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3199288
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1101.7844286E-952.3636368
TCGGCGG2105.303482E-727.428579
TTATCGG2404.6059293E-521.06
TATCGGC2404.6059293E-521.07
GGGTTCG3600.00687860655.210-14
TTACCGA3650.0080809195.12876720-24
Produced by FastQC (version 0.11.5)