FastQCFastQC Report
Wed 13 Jul 2022
EGAF00005773365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005773365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508298567
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22998140.4524533707764712No Hit
GTCTTTGATTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15812330.3110835053760834No Hit
GTCTTTGATTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6191380.12180596999400944No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)