FastQCFastQC Report
Wed 13 Jul 2022
EGAF00005773369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005773369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456322432
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT16295890.3571134982029549No Hit
GTCTTTGATTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10551000.23121808747723363No Hit
GTCTTTGATTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4738430.10383951495069171No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)