FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005776678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112290815
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT2370580.21111076627237943No Hit
ACTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT1581630.14085123525018498No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1326010.11808712938809823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)