FastQCFastQC Report
Thu 16 May 2024
EGAF00005776690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88818959
Total Bases6.7 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5785760.6514104719466483No Hit
TGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTGACTT1018980.11472550584611108No Hit
TGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCA1006990.11337556883547803No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)