FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005776697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107173363
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT2171600.20262497501361415No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1595090.14883269082449155No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1417430.132255810615927No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1353220.12626458311287667No Hit
ACTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT1302580.12153952843674412No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)