FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005776698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107173363
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5085770.47453675592880296No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT2440920.22775435347680562No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2281650.21289338471164707No Hit
ACTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT1348860.1258577656091654No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)