FastQCFastQC Report
Sun 19 May 2024
EGAF00005776706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206774783
Total Bases15.6 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4029250.19486176900013966No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3676870.17782003910989475No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)