Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005776717 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 44917529 |
Total Bases | 4.4 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGGAGAATCTCGTAT | 446841 | 0.9948031647065894 | TruSeq Adapter, Index 6 (97% over 36bp) |
TGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCAATTG | 47270 | 0.10523731169628676 | No Hit |
CTCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCT | 46044 | 0.10250786502525551 | No Hit |
GCTGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCAAT | 45203 | 0.10063554475581236 | No Hit |