FastQCFastQC Report
Thu 16 May 2024
EGAF00005776737

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776737
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84118950
Total Bases8.4 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCT909350.10810287099399125No Hit
TATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCACT890010.10580374576715473No Hit
AACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCT878400.10442355735538782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)