FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005776876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106868461
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1975750.18487680850948157No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1864550.17447149351201005No Hit
CTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAA1406580.1316178774203551No Hit
CTTTGTGTTTGAGGGGGTCTTAGCTTTGGCTCTCCTTGCAAAGTTATTTC1217850.11395784954739828No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)