FastQCFastQC Report
Thu 16 May 2024
EGAF00005776898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111863135
Total Bases8.4 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1478530.13217312388035612No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1215370.10864794733314062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)