FastQCFastQC Report
Thu 6 Oct 2022
EGAF00005776946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112425959
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC2319510.2063144509178703No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2242780.19948951469473344No Hit
CTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAA2156050.1917751041821222No Hit
ACTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAA1466400.13043250980852208No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT1139230.10133157947978902No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)