FastQCFastQC Report
Thu 6 Oct 2022
EGAF00005776968

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005776968
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126239013
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5198110.41176731950526263No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT1760090.13942520288874566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)