FastQCFastQC Report
Thu 16 May 2024
EGAF00005777056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005777056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132684065
Total Bases10 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAA1649000.1242801839090474No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC1362040.10265286943085442No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)