FastQCFastQC Report
Thu 16 May 2024
EGAF00005777058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005777058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129898496
Total Bases9.8 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2574700.19820860743453103No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1426970.10985269606200829No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)