FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005777237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005777237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6111355
Sequences flagged as poor quality0
Sequence length35-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTAGCG5350.00569324067.93573
CGCGACC6508.776932E-46.18383494-95
Produced by FastQC (version 0.11.5)